Paracoccus yeei str. TT13

Gram-negativeCocciNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus yeei strain TT13 is a Gram-negative, nonsporulating coccus that functions as a chemoheterotroph, deriving its energy from organic compounds. This microbe is predominantly found in soil environments, where it plays a role in the decomposition of organic matter and nutrient cycling. As an aerobe, P. yeei strain TT13 requires oxygen for its metabolic processes, which is typical of many soil-dwelling bacteria that contribute to aerobic degradation pathways. The spherical morphology of this strain may influence its interactions within soil microbiomes, potentially affecting its ability to colonize specific niches or compete for resources. The nonsporulating characteristic suggests that P. yeei strain TT13 may rely on other survival strategies to withstand unfavorable conditions in its habitat, such as forming biofilms or engaging in cooperative interactions with other microbial species. Understanding the traits of Paracoccus yeei strain TT13 not only highlights its role in soil ecosystems but also emphasizes the importance of aerobic chemoheterotrophs in maintaining soil health and fertility. The microbe's adaptations to its environment could provide insights into the resilience and functionality of microbial communities in response to environmental changes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus yeei
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Paracoccus yeei str. TT13
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Paracoccus yeei str. TT13

Accession NumberNZ_CP024426.1

Gene Summary

Adenine Count

26973 bp

Thymine Count

26529 bp

Guanine Count

58988 bp

Cytosine Count

59533 bp

Genome Length

172023 bp

Protein-coding Genes

140 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
aaa family atpasePYTT13_RS19325Not Available+101 - 140549141.3
parb/repb/spo0j family partition proteinPYTT13_RS19330Not Available+1402 - 251140918.2
rok family proteinPYTT13_RS19335Not Available+2716 - 362430472.9
n-acetylglucosamine-6-phosphate deacetylasePYTT13_RS19340Not Available+3618 - 471537781.2
cobw family gtp-binding proteinPYTT13_RS19345Not Available+4712 - 570733905.2
lytic murein transglycosylasePYTT13_RS19350Not Available+5783 - 706646115.4
acyl-coa thioesterasePYTT13_RS19355Not Available-7086 - 748114102.8
l-cystine transporterPYTT13_RS19360Not Available-7550 - 893847560.4
type ii toxin-antitoxin system vapc family toxinPYTT13_RS19365Not Available-9085 - 950114863.8
type ii toxin-antitoxin system phd/yefm family antitoxinPYTT13_RS19370Not Available-9502 - 97568966.65

Displaying genes 141 – 150 of 777 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites