Paracoccus yeei str. CCUG 32053

Gram-negativeCocciNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus yeei strain CCUG 32053 is a Gram-negative, nonsporulating coccus that exhibits chemoheterotrophic metabolism, utilizing organic compounds as its primary energy source. This microbe is obligately aerobic, requiring oxygen for its growth and metabolic processes. As a member of the soil microbiome, P. yeei str. CCUG 32053 plays a potential role in the degradation of organic matter, contributing to nutrient cycling within its habitat. The coccoid morphology of P. yeei suggests adaptability to various environmental conditions, particularly in soil ecosystems where such shapes can be advantageous for surviving in diverse microhabitats. Its aerobic nature indicates a reliance on oxygen-rich environments, which may influence its distribution and ecological interactions within soil communities. The absence of sporulation in this strain further emphasizes its adaptation to stable environments where long-term survival strategies like spore formation are not necessary. Understanding the traits of Paracoccus yeei str. CCUG 32053 can provide insights into its functional roles in soil ecosystems, particularly in relation to organic matter decomposition and nutrient cycling, thereby highlighting its importance in maintaining soil health and fertility.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus yeei
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Paracoccus yeei str. CCUG 32053
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Paracoccus yeei str. CCUG 32053

Accession NumberNZ_CP031078.1

Gene Summary

Adenine Count

555292 bp

Thymine Count

554124 bp

Guanine Count

1156723 bp

Cytosine Count

1155540 bp

Genome Length

3421679 bp

Protein-coding Genes

3284 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
duf305 domain-containing proteinPY32053_RS15705Not Available+3163614 - 316411718971.4
tlpa disulfide reductase family proteinPY32053_RS15710Not Available-3164249 - 316504929195.4
protein-disulfide reductase dsbdPY32053_RS15715Not Available-3165051 - 316690164651.4
dsba family proteinPY32053_RS15720Not Available-3166901 - 316749421190.0
thioredoxin family proteinPY32053_RS15725Not Available-3167696 - 316823519751.9
l,d-transpeptidasePY32053_RS15730Not Available+3168571 - 316922724329.0
atp-binding proteinPY32053_RS15735Not Available-3169335 - 317067548451.8
response regulator transcription factorPY32053_RS15740Not Available-3170675 - 317133724301.2
is66-like element accessory protein tnpaPY32053_RS15745Not Available+3172299 - 317270914858.0
is66 family insertion sequence element accessory protein tnpbPY32053_RS15750Not Available+3172706 - 317305612753.6

Displaying genes 3191 – 3200 of 3445 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites