Paracoccus yeei str. CCUG 32053

Gram-negativeCocciNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus yeei strain CCUG 32053 is a Gram-negative, nonsporulating coccus that exhibits chemoheterotrophic metabolism, utilizing organic compounds as its primary energy source. This microbe is obligately aerobic, requiring oxygen for its growth and metabolic processes. As a member of the soil microbiome, P. yeei str. CCUG 32053 plays a potential role in the degradation of organic matter, contributing to nutrient cycling within its habitat. The coccoid morphology of P. yeei suggests adaptability to various environmental conditions, particularly in soil ecosystems where such shapes can be advantageous for surviving in diverse microhabitats. Its aerobic nature indicates a reliance on oxygen-rich environments, which may influence its distribution and ecological interactions within soil communities. The absence of sporulation in this strain further emphasizes its adaptation to stable environments where long-term survival strategies like spore formation are not necessary. Understanding the traits of Paracoccus yeei str. CCUG 32053 can provide insights into its functional roles in soil ecosystems, particularly in relation to organic matter decomposition and nutrient cycling, thereby highlighting its importance in maintaining soil health and fertility.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus yeei
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Paracoccus yeei str. CCUG 32053
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Paracoccus yeei str. CCUG 32053

Accession NumberNZ_CP031078.1

Gene Summary

Adenine Count

555292 bp

Thymine Count

554124 bp

Guanine Count

1156723 bp

Cytosine Count

1155540 bp

Genome Length

3421679 bp

Protein-coding Genes

3284 genes

Non-Coding Genes

161 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
lyse family translocatorPY32053_RS14860Not Available+3008511 - 300914021728.4
pseudouridine synthasePY32053_RS14865Not Available+3009137 - 300978424178.3
mbl fold metallo-hydrolasePY32053_RS14870Not Available+3009845 - 301078333070.1
gfa family proteinPY32053_RS14875Not Available+3010780 - 301121115508.3
trna pseudouridine(55) synthase trubPY32053_RS14880Not Available-3011198 - 301209431477.6
phosphodiester glycosidase family proteinPY32053_RS14885Not Available-3012095 - 301285026907.2
30s ribosome-binding factor rbfaPY32053_RS14890Not Available-3012840 - 301325915603.4
4-hydroxy-tetrahydrodipicolinate reductasePY32053_RS14895Not Available+3013329 - 301413527668.3
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaePY32053_RS14900Not Available+3014160 - 301557551142.4
nucleotidyltransferase family proteinPY32053_RS14905Not Available+3015572 - 301624023602.9

Displaying genes 3021 – 3030 of 3445 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites