Weissella cibaria str. DmW_103

Gram-negativeFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Weissella

Description

Weissella cibaria str. DmW_103 is a Gram-negative, facultative anaerobic bacterium that has been isolated from various habitats, including Korean kimchi, tropical fruits, pasture, saliva, and soil. This microbe is part of the diverse microbiota associated with fermented foods, particularly those prevalent in Korean cuisine, where it may play a role in the fermentation process of kimchi. Its ability to thrive in both aerobic and anaerobic conditions suggests a versatile metabolic capacity that allows it to adapt to different environmental niches. The presence of Weissella cibaria str. DmW_103 in diverse habitats, such as the human saliva and the fermentation of tropical fruits, indicates its potential significance in both food production and oral microbiology. The bacterium may contribute to the flavor and texture profiles of fermented products, while its presence in the oral cavity highlights its role in the complex dynamics of the oral microbiome. This adaptability could provide insights into its functional roles in fermentation and health, emphasizing the importance of microbial diversity in both ecological and dietary contexts. Understanding the specific contributions of Weissella cibaria str. DmW_103 may further elucidate its significance in fermentation science and its interactions within various ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusWeissella
SpeciesWeissella cibaria
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatChili Bo; Korean kimchi; pasture; saliva; soil; tropical fruits
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Weissella cibaria str. DmW_103

Accession NumberNDXJ00000000.1

Gene Summary

Adenine Count

680634 bp

Thymine Count

675367 bp

Guanine Count

568674 bp

Cytosine Count

540937 bp

Genome Length

2465612 bp

Protein-coding Genes

2159 genes

Non-Coding Genes

160 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
3,4-dihydroxy-2-butanone-4-phosphate synthaseB9D04_06645Not Available+1373527 - 137415621919.1
5-(carboxyamino)imidazole ribonucleotide mutaseB9D04_06650Not Available+1374418 - 137490616987.8
5-(carboxyamino)imidazole ribonucleotide synthaseB9D04_06655Not Available+1374899 - 137601740389.9
phosphoribosylaminoimidazolesuccinocarboxamide synthaseB9D04_06660Not Available+1376014 - 137673926484.7
phosphoribosylformylglycinamidine synthaseB9D04_06665Not Available+1376742 - 13769999465.18
phosphoribosylformylglycinamidine synthase iB9D04_06670Not Available+1377001 - 137768424498.3
phosphoribosylformylglycinamidine synthase iiB9D04_06675Not Available+1377681 - 137990378838.3
amidophosphoribosyltransferaseB9D04_06680Not Available+1379888 - 138142355631.2
phosphoribosylformylglycinamidine cyclo-ligaseB9D04_06685Not Available+1381435 - 138247536040.0
phosphoribosylglycinamide formyltransferaseB9D04_06690Not Available+1382466 - 138305920971.7

Displaying genes 1371 – 1380 of 2319 in total

Pathways

22 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites