Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4136 domain-containing protein | SAMIE_RS00025 | Not Available | - | 4213 - 4881 | 23908.2 |
| tryptophan--trna ligase | SAMIE_RS00030 | Not Available | - | 5123 - 6127 | 36240.5 |
| murein biosynthesis integral membrane protein murj | SAMIE_RS00035 | Not Available | - | 6149 - 7723 | 55751.4 |
| protein-export chaperone secb | SAMIE_RS00045 | Not Available | - | 7861 - 8361 | 17983.3 |
| tim44/tima family putative adaptor protein | SAMIE_RS00050 | Not Available | + | 8548 - 9201 | 23937.4 |
| murein transglycosylase a | SAMIE_RS00055 | Not Available | + | 9209 - 10471 | 43836.3 |
| smr/muts family protein | SAMIE_RS00060 | Not Available | + | 10475 - 11020 | 19670.9 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | SAMIE_RS00065 | Not Available | + | 11122 - 12807 | 59970.9 |
| succinyl-diaminopimelate desuccinylase | SAMIE_RS00070 | Not Available | - | 13051 - 14193 | 40166.2 |
| cupin domain-containing protein | SAMIE_RS00075 | Not Available | + | 14251 - 14694 | 16023.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.