Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative major capsid protein | SAMIE_RS01790 | Not Available | + | 388836 - 389951 | 38728.8 |
| phage head-tail connector protein | SAMIE_RS01795 | Not Available | + | 390034 - 390579 | 19085.9 |
| hypothetical protein | SAMIE_RS01800 | Not Available | + | 390576 - 390758 | 6605.14 |
| duf3168 domain-containing protein | SAMIE_RS01805 | Not Available | + | 390755 - 391159 | 13769.6 |
| hypothetical protein | SAMIE_RS01810 | Not Available | - | 391339 - 391665 | 11247.0 |
| Gene transfer aget (gta) orfg9-like phage major tail protein | SAMIE_RS01815 | Not Available | + | 391721 - 392128 | 14162.5 |
| gene transfer agent family protein | SAMIE_RS01820 | Not Available | + | 392125 - 392451 | 11055.4 |
| phage tail assembly chaperone | SAMIE_RS01825 | Not Available | + | 392448 - 392651 | 7015.37 |
| Hypothetical protein | SAMIE_RS01830 | Not Available | + | 392737 - 393297 | 18609.4 |
| Capsid protein | SAMIE_RS01835 | Not Available | + | 393294 - 395624 | 83780.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.