Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mucr family transcriptional regulator | SAMIE_RS04445 | Not Available | - | 945060 - 945485 | 15590.9 |
| gnat family n-acetyltransferase | SAMIE_RS04450 | Not Available | - | 945598 - 946077 | 17650.3 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | SAMIE_RS04455 | Not Available | - | 946074 - 946700 | 21088.2 |
| nifu family protein | SAMIE_RS04460 | Not Available | - | 946786 - 947364 | 20234.8 |
| pyridoxamine 5'-phosphate oxidase family protein | SAMIE_RS04465 | Not Available | + | 947460 - 947930 | 17495.8 |
| dead/deah box helicase | SAMIE_RS04470 | Not Available | + | 948216 - 949601 | 50479.1 |
| m16 family metallopeptidase | SAMIE_RS04475 | Not Available | + | 949713 - 952598 | 104013.0 |
| hypothetical protein | SAMIE_RS23285 | Not Available | - | 952602 - 952757 | 5998.2 |
| hypothetical protein | SAMIE_RS04480 | Not Available | - | 952909 - 953220 | 11076.6 |
| is21 family transposase | SAMIE_RS04485 | Not Available | + | 953332 - 954846 | 57437.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.