Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-processing protein dpra | SAMIE_RS04345 | Not Available | + | 923887 - 924969 | 37630.5 |
| yoak family protein | SAMIE_RS04350 | Not Available | + | 924966 - 925607 | 21583.8 |
| type i dna topoisomerase | SAMIE_RS04355 | Not Available | + | 925680 - 928229 | 93303.8 |
| gtpase era | SAMIE_RS04360 | Not Available | - | 928247 - 929155 | 33402.4 |
| ribonuclease iii | SAMIE_RS04365 | Not Available | - | 929252 - 929935 | 24464.8 |
| signal peptidase i | SAMIE_RS04370 | Not Available | - | 929932 - 930756 | 30176.4 |
| glucose-6-phosphate isomerase | SAMIE_RS04375 | Not Available | + | 930938 - 932443 | 53237.2 |
| glutathione-disulfide reductase | SAMIE_RS04380 | Not Available | + | 932595 - 933941 | 48699.2 |
| universal stress protein | SAMIE_RS04385 | Not Available | - | 933949 - 934404 | 15682.0 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | SAMIE_RS04390 | Not Available | + | 934589 - 935884 | 44585.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.