Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein-ubiquinone oxidoreductase | SAMIE_RS04245 | Not Available | + | 901455 - 903107 | 60183.8 |
| tetratricopeptide repeat protein | SAMIE_RS04250 | Not Available | + | 903133 - 904746 | 56544.6 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | SAMIE_RS04255 | Not Available | + | 904733 - 905611 | 30182.1 |
| n-formylglutamate amidohydrolase | SAMIE_RS04260 | Not Available | + | 905608 - 906324 | 25637.8 |
| hypothetical protein | SAMIE_RS04265 | Not Available | + | 906321 - 906656 | 11747.9 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | SAMIE_RS04270 | Not Available | + | 906656 - 908047 | 46802.4 |
| class i sam-dependent rna methyltransferase | SAMIE_RS04275 | Not Available | + | 908044 - 909246 | 42627.2 |
| type iii plp-dependent enzyme | SAMIE_RS04280 | Not Available | - | 909289 - 910494 | 43567.0 |
| carboxynorspermidine decarboxylase | SAMIE_RS04285 | Not Available | - | 910642 - 911814 | 42815.2 |
| saccharopine dehydrogenase family protein | SAMIE_RS04290 | Not Available | - | 911943 - 913148 | 44652.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.