Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2840 domain-containing protein | SAMIE_RS03845 | Not Available | + | 812304 - 812810 | 19143.0 |
| s26 family signal peptidase | SAMIE_RS03850 | Not Available | + | 812807 - 813352 | 19413.8 |
| duf736 domain-containing protein | SAMIE_RS23600 | Not Available | + | 813388 - 813723 | 12401.2 |
| lytic transglycosylase domain-containing protein | SAMIE_RS03860 | Not Available | + | 813857 - 814639 | 26611.3 |
| relaxase/mobilization nuclease domain-containing protein | SAMIE_RS03865 | Not Available | + | 814878 - 816638 | 64088.5 |
| conjugal transfer protein trag | SAMIE_RS03870 | Not Available | + | 816654 - 818627 | 72062.6 |
| copg family transcriptional regulator | SAMIE_RS03875 | Not Available | + | 818637 - 819065 | 16101.2 |
| p-type conjugative transfer atpase trbb | SAMIE_RS03880 | Not Available | + | 819239 - 820225 | 34767.2 |
| trbc/virb2 family protein | SAMIE_RS03885 | Not Available | + | 820222 - 820557 | 11414.1 |
| virb3 family type iv secretion system protein | SAMIE_RS03890 | Not Available | + | 820554 - 820835 | 10014.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.