Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system prlf family antitoxin | SAMIE_RS03750 | Not Available | - | 793926 - 794252 | 11504.6 |
| qat anti-phage system atpase qata | SAMIE_RS03755 | Not Available | + | 794448 - 796469 | 73051.0 |
| qat anti-phage system associated protein qatb | SAMIE_RS03760 | Not Available | + | 796760 - 797353 | 20558.3 |
| qat anti-phage system quec-like protein qatc | SAMIE_RS03765 | Not Available | + | 797482 - 798699 | 43808.8 |
| qat anti-phage system tatd family nuclease qatd | SAMIE_RS03770 | Not Available | + | 798708 - 799460 | 27684.3 |
| hypothetical protein | SAMIE_RS03775 | Not Available | - | 799512 - 800057 | 20801.1 |
| parb/repb/spo0j family partition protein | SAMIE_RS03780 | Not Available | + | 800557 - 802500 | 71379.6 |
| is21 family transposase | SAMIE_RS03785 | Not Available | + | 802565 - 804103 | 58195.2 |
| is21-like element helper atpase istb | SAMIE_RS03790 | Not Available | + | 804090 - 804818 | 26409.0 |
| hypothetical protein | SAMIE_RS23280 | Not Available | + | 805070 - 805216 | 4996.55 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.