Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | SAMIE_RS03150 | Not Available | - | 674226 - 676103 | 65550.2 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | SAMIE_RS03155 | Not Available | + | 676261 - 676947 | 25872.7 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMIE_RS03160 | Not Available | + | 677043 - 677531 | 16682.3 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | SAMIE_RS03165 | Not Available | + | 677541 - 678611 | 37723.9 |
| dihydrofolate reductase | SAMIE_RS03170 | Not Available | + | 678608 - 679093 | 17695.3 |
| riboflavin biosynthesis protein ribf | SAMIE_RS03175 | Not Available | + | 679131 - 680057 | 32856.4 |
| isoleucine--trna ligase | SAMIE_RS03180 | Not Available | + | 680100 - 683105 | 112658.0 |
| signal peptidase ii | SAMIE_RS03185 | Not Available | + | 683110 - 683625 | 19060.7 |
| duf3035 domain-containing protein | SAMIE_RS03190 | Not Available | + | 683622 - 684038 | 13649.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMIE_RS03195 | Not Available | - | 684079 - 685995 | 68207.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.