Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cher family methyltransferase | SAMIE_RS03000 | Not Available | - | 638315 - 639178 | 32745.7 |
| response regulator | SAMIE_RS03005 | Not Available | - | 639175 - 642282 | 112462.0 |
| nudix domain-containing protein | SAMIE_RS03010 | Not Available | + | 642461 - 643234 | 27779.0 |
| extensin family protein | SAMIE_RS03015 | Not Available | + | 643238 - 643963 | 26733.1 |
| anthranilate synthase component i | SAMIE_RS03020 | Not Available | - | 643968 - 645488 | 53632.2 |
| peptidylprolyl isomerase | SAMIE_RS03025 | Not Available | - | 645490 - 647439 | 69266.1 |
| triose-phosphate isomerase | SAMIE_RS03030 | Not Available | + | 647647 - 648411 | 26276.6 |
| preprotein translocase subunit secg | SAMIE_RS03035 | Not Available | + | 648510 - 648884 | 12201.9 |
| ctp synthase | SAMIE_RS03040 | Not Available | + | 648975 - 650606 | 59570.1 |
| pqq-dependent sugar dehydrogenase | SAMIE_RS03045 | Not Available | - | 650676 - 651812 | 40485.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.