Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1330 domain-containing protein | SAMIE_RS02810 | Not Available | + | 596291 - 596569 | 9912.72 |
| hypothetical protein | SAMIE_RS02815 | Not Available | + | 596630 - 597082 | 16281.3 |
| rna polymerase sigma factor | SAMIE_RS02820 | Not Available | + | 597374 - 597946 | 21526.6 |
| hypothetical protein | SAMIE_RS02825 | Not Available | - | 598283 - 598573 | 9585.48 |
| marr family winged helix-turn-helix transcriptional regulator | SAMIE_RS02830 | Not Available | + | 598729 - 599172 | 15877.3 |
| nitrilase-related carbon-nitrogen hydrolase | SAMIE_RS02835 | Not Available | + | 599209 - 600213 | 36890.9 |
| sam-dependent methyltransferase | SAMIE_RS02840 | Not Available | + | 600244 - 601098 | 30537.6 |
| dihydrolipoyl dehydrogenase | SAMIE_RS02845 | Not Available | - | 601133 - 602590 | 51941.6 |
| response regulator | SAMIE_RS02850 | Not Available | + | 602671 - 603165 | 17499.8 |
| hypothetical protein | SAMIE_RS02855 | Not Available | + | 603736 - 604227 | 17946.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.