Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-ketoglutarate-dependent dioxygenase alkb | SAMIE_RS02565 | Not Available | - | 544750 - 545352 | 22269.7 |
| hypothetical protein | SAMIE_RS02570 | Not Available | - | 545346 - 545630 | 10532.2 |
| sos response-associated peptidase family protein | SAMIE_RS02575 | Not Available | - | 545660 - 546181 | 19628.6 |
| sos response-associated peptidase family protein | SAMIE_RS02580 | Not Available | + | 546238 - 546846 | 22892.2 |
| duf3008 family protein | SAMIE_RS02585 | Not Available | + | 546915 - 547103 | 6637.96 |
| sdr family oxidoreductase | SAMIE_RS02590 | Not Available | - | 547167 - 548024 | 30450.1 |
| dna ligase d | SAMIE_RS02595 | Not Available | + | 548482 - 550308 | 66776.8 |
| exodeoxyribonuclease iii | SAMIE_RS02600 | Not Available | + | 550305 - 551132 | 30871.8 |
| cupin domain-containing protein | SAMIE_RS02605 | Not Available | + | 551129 - 551629 | 18006.0 |
| dksa/trar family c4-type zinc finger protein | SAMIE_RS02610 | Not Available | - | 551652 - 551915 | 9350.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.