Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xrta/pep-cterm system histidine kinase prsk | SAMIE_RS02215 | Not Available | + | 471498 - 473579 | 75605.7 |
| pep-cterm-box response regulator transcription factor | SAMIE_RS02220 | Not Available | + | 473579 - 474886 | 47209.0 |
| tetratricopeptide repeat protein | SAMIE_RS02225 | Not Available | + | 474889 - 476820 | 67532.2 |
| orotidine-5'-phosphate decarboxylase | SAMIE_RS02230 | Not Available | - | 476817 - 477491 | 23333.3 |
| lipopolysaccharide assembly protein lapa domain-containing protein | SAMIE_RS02235 | Not Available | - | 477488 - 477835 | 12527.5 |
| aldose 1-epimerase | SAMIE_RS02240 | Not Available | - | 477872 - 478741 | 31058.8 |
| sugar porter family mfs transporter | SAMIE_RS02245 | Not Available | - | 478759 - 480171 | 49163.6 |
| smp-30/gluconolactonase/lre family protein | SAMIE_RS02250 | Not Available | - | 480203 - 481078 | 31018.5 |
| sdr family nad(p)-dependent oxidoreductase | SAMIE_RS02255 | Not Available | - | 481080 - 481838 | 27232.5 |
| fumarylacetoacetate hydrolase family protein | SAMIE_RS02260 | Not Available | - | 481835 - 482977 | 40287.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.