Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative bifunctional diguanylate cyclase/phosphodiesterase | SAMIE_RS02170 | Not Available | + | 461218 - 463167 | 70744.5 |
| crotonase/enoyl-coa hydratase family protein | SAMIE_RS02175 | Not Available | - | 463174 - 464130 | 35637.0 |
| hypothetical protein | SAMIE_RS23255 | Not Available | + | 464368 - 464544 | 6640.92 |
| trna guanosine(34) transglycosylase tgt | SAMIE_RS02180 | Not Available | + | 464594 - 465724 | 41325.6 |
| sensor histidine kinase | SAMIE_RS02185 | Not Available | - | 465735 - 467243 | 55918.7 |
| nepr family anti-sigma factor | SAMIE_RS02190 | Not Available | - | 467332 - 467544 | 7593.03 |
| response regulator | SAMIE_RS02195 | Not Available | + | 467882 - 468673 | 28708.3 |
| sigma-70 family rna polymerase sigma factor | SAMIE_RS02200 | Not Available | + | 468972 - 469616 | 23922.3 |
| hypothetical protein | SAMIE_RS02205 | Not Available | + | 469667 - 469927 | 9308.93 |
| tigr03013 family xrta/pep-cterm system glycosyltransferase | SAMIE_RS02210 | Not Available | + | 470097 - 471485 | 51920.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.