Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cdp-alcohol phosphatidyltransferase family protein | SAMIE_RS01970 | Not Available | - | 418764 - 419870 | 40844.1 |
| glycosyl transferase | SAMIE_RS01975 | Not Available | - | 419867 - 420937 | 39497.5 |
| succinate dehydrogenase iron-sulfur subunit | SAMIE_RS01980 | Not Available | + | 421103 - 421891 | 29512.2 |
| paai family thioesterase | SAMIE_RS01985 | Not Available | + | 421893 - 422354 | 16039.2 |
| cell division protein zape | SAMIE_RS01990 | Not Available | + | 422351 - 423463 | 41196.8 |
| phosphatase pap2 family protein | SAMIE_RS01995 | Not Available | - | 423471 - 424028 | 18953.6 |
| malate dehydrogenase | SAMIE_RS02000 | Not Available | + | 424376 - 425338 | 33409.6 |
| succinate--coa ligase subunit alpha | SAMIE_RS02005 | Not Available | + | 425440 - 426324 | 29987.4 |
| 2-oxoglutarate dehydrogenase e1 component | SAMIE_RS02010 | Not Available | + | 426414 - 429209 | 102525.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | SAMIE_RS02015 | Not Available | + | 429216 - 430472 | 43355.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.