Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein cpae | SAMIE_RS01920 | Not Available | - | 409121 - 410401 | 45842.2 |
| cpad family pilus assembly protein | SAMIE_RS01925 | Not Available | - | 410403 - 411056 | 22506.2 |
| type ii and iii secretion system protein family protein | SAMIE_RS01930 | Not Available | - | 411071 - 412525 | 50524.5 |
| flp pilus assembly protein cpab | SAMIE_RS01935 | Not Available | - | 412527 - 413537 | 34406.5 |
| prepilin peptidase | SAMIE_RS01940 | Not Available | - | 413589 - 414062 | 16762.2 |
| alpha/beta fold hydrolase | SAMIE_RS01945 | Not Available | + | 414114 - 415067 | 35199.2 |
| nad(p)/fad-dependent oxidoreductase | SAMIE_RS01950 | Not Available | + | 415064 - 416167 | 38889.3 |
| lipopolysaccharide biosynthesis protein | SAMIE_RS01955 | Not Available | - | 416164 - 417471 | 45528.0 |
| sugar phosphate nucleotidyltransferase | SAMIE_RS01960 | Not Available | + | 417584 - 418354 | 28212.8 |
| hit family protein | SAMIE_RS01965 | Not Available | - | 418342 - 418767 | 15407.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.