Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna 2',3'-cyclic phosphodiesterase | SAMIE_RS01870 | Not Available | - | 401588 - 402130 | 20017.0 |
| bax inhibitor-1 family protein | SAMIE_RS01875 | Not Available | + | 402276 - 403022 | 26494.9 |
| glutathione s-transferase family protein | SAMIE_RS01880 | Not Available | - | 403095 - 403724 | 22835.2 |
| urca family protein | SAMIE_RS01885 | Not Available | + | 404042 - 404398 | 12432.0 |
| vit family protein | SAMIE_RS01890 | Not Available | + | 404529 - 405242 | 23501.3 |
| glutathione peroxidase | SAMIE_RS01895 | Not Available | + | 405284 - 405829 | 18997.5 |
| trimeric intracellular cation channel family protein | SAMIE_RS01900 | Not Available | + | 405863 - 406501 | 21820.1 |
| duf2147 domain-containing protein | SAMIE_RS01905 | Not Available | - | 406506 - 406922 | 14676.8 |
| type ii secretion system f family protein | SAMIE_RS01910 | Not Available | - | 407052 - 408041 | 36016.8 |
| type ii secretion system f family protein | SAMIE_RS01915 | Not Available | - | 408063 - 409061 | 36597.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.