Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional repressor agar | SAMIE_RS01475 | Not Available | - | 313781 - 314560 | 28177.0 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | SAMIE_RS01480 | Not Available | - | 314708 - 315358 | 21608.3 |
| 2-dehydro-3-deoxygalactonokinase | SAMIE_RS01485 | Not Available | - | 315355 - 316224 | 30442.6 |
| sodium/sugar symporter | SAMIE_RS01490 | Not Available | - | 316232 - 317803 | 56059.9 |
| fadr/gntr family transcriptional regulator | SAMIE_RS01495 | Not Available | + | 318024 - 318707 | 24742.4 |
| hypothetical protein | SAMIE_RS01500 | Not Available | + | 318919 - 319503 | 19308.7 |
| hypothetical protein | SAMIE_RS23240 | Not Available | + | 319583 - 320089 | 16801.9 |
| tcfc e-set like domain-containing protein | SAMIE_RS01505 | Not Available | + | 320104 - 322626 | 88964.7 |
| molecular chaperone | SAMIE_RS01510 | Not Available | + | 322623 - 323318 | 24810.0 |
| response regulator | SAMIE_RS01515 | Not Available | - | 323334 - 323735 | 14554.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.