Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMIE_RS01275 | Not Available | + | 265943 - 266134 | 6579.35 |
| atp-dependent zinc metalloprotease ftsh | SAMIE_RS01280 | Not Available | + | 266235 - 268184 | 70495.8 |
| serpin family protein | SAMIE_RS01285 | Not Available | + | 268406 - 269713 | 47711.3 |
| imp dehydrogenase | SAMIE_RS01290 | Not Available | + | 269880 - 271337 | 51172.8 |
| rsmb/nop family class i sam-dependent rna methyltransferase | SAMIE_RS01295 | Not Available | + | 271470 - 272648 | 41516.6 |
| tetratricopeptide repeat protein | SAMIE_RS01300 | Not Available | + | 272721 - 273236 | 17674.3 |
| pseudouridine synthase | SAMIE_RS01305 | Not Available | - | 273244 - 273792 | 20179.4 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | SAMIE_RS01310 | Not Available | - | 273968 - 274804 | 29997.7 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | SAMIE_RS01315 | Not Available | - | 274797 - 275825 | 35478.9 |
| peptidylprolyl isomerase | SAMIE_RS01320 | Not Available | - | 275803 - 277188 | 50203.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.