Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system secretin trak | SAMIE_RS01125 | Not Available | - | 231095 - 231850 | 26798.6 |
| type iv conjugative transfer system protein trae | SAMIE_RS01130 | Not Available | - | 231850 - 232422 | 20941.2 |
| type iv conjugative transfer system protein tral | SAMIE_RS01135 | Not Available | - | 232434 - 232721 | 10531.9 |
| hypothetical protein | SAMIE_RS01140 | Not Available | - | 232748 - 233077 | 10686.2 |
| hypothetical protein | SAMIE_RS01145 | Not Available | + | 233428 - 233889 | 17023.6 |
| alpa family transcriptional regulator | SAMIE_RS01150 | Not Available | + | 233936 - 234166 | 8668.58 |
| hypothetical protein | SAMIE_RS01155 | Not Available | + | 234167 - 234400 | 8043.37 |
| hypothetical protein | SAMIE_RS01160 | Not Available | + | 234920 - 236182 | 46540.1 |
| hypothetical protein | SAMIE_RS01165 | Not Available | + | 236179 - 237084 | 32052.0 |
| aaa family atpase | SAMIE_RS01170 | Not Available | + | 237094 - 241875 | 170766.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.