Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system pilin assembly protein trbc | SAMIE_RS01075 | Not Available | - | 221715 - 222479 | 26345.2 |
| conjugal transfer pilus assembly protein trau | SAMIE_RS01080 | Not Available | - | 222476 - 223504 | 37314.5 |
| type-f conjugative transfer system protein traw | SAMIE_RS01085 | Not Available | - | 223501 - 224148 | 23887.2 |
| s26 family signal peptidase | SAMIE_RS01090 | Not Available | - | 224145 - 224681 | 18997.2 |
| type-f conjugative transfer system protein trbi | SAMIE_RS01095 | Not Available | - | 224668 - 225075 | 14536.8 |
| hypothetical protein | SAMIE_RS01100 | Not Available | - | 225072 - 225464 | 14622.0 |
| type iv secretion system protein trac | SAMIE_RS01105 | Not Available | - | 225494 - 228037 | 93028.1 |
| conjugal transfer protein trav | SAMIE_RS01110 | Not Available | - | 228037 - 228846 | 27888.4 |
| dsbc family protein | SAMIE_RS01115 | Not Available | - | 228851 - 229765 | 31940.5 |
| trbi/virb10 family protein | SAMIE_RS01120 | Not Available | - | 229762 - 231102 | 45749.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.