Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | SAMIE_RS00515 | Not Available | + | 99946 - 100512 | 21877.2 |
| crp/fnr family transcriptional regulator | SAMIE_RS00520 | Not Available | - | 100509 - 101240 | 27322.1 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMIE_RS00525 | Not Available | + | 101451 - 102734 | 44817.5 |
| pas domain-containing protein | SAMIE_RS00530 | Not Available | + | 102727 - 104253 | 56678.4 |
| response regulator | SAMIE_RS00535 | Not Available | - | 104201 - 104635 | 15092.9 |
| hypothetical protein | SAMIE_RS00540 | Not Available | - | 104706 - 104957 | 8985.48 |
| dna-3-methyladenine glycosylase family protein | SAMIE_RS00545 | Not Available | - | 104962 - 105579 | 22298.9 |
| 2fe-2s iron-sulfur cluster-binding protein | SAMIE_RS00550 | Not Available | + | 105659 - 105976 | 11264.2 |
| trmh family rna methyltransferase | SAMIE_RS00555 | Not Available | - | 105992 - 106732 | 26503.7 |
| Tmrna,resume consensus sequence (at 471): cagaggcgcggcaaaaag | Not Available | Not Available | + | 106831 - 107425 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.