Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| winged helix dna-binding protein | SAMIE_RS00375 | Not Available | - | 71066 - 72094 | 37107.4 |
| d-amino-acid transaminase | SAMIE_RS00380 | Not Available | - | 72298 - 73149 | 30142.2 |
| rna polymerase factor sigma-54 | SAMIE_RS00385 | Not Available | - | 73329 - 74840 | 53684.2 |
| lps export abc transporter atp-binding protein | SAMIE_RS00390 | Not Available | - | 74886 - 75671 | 28372.4 |
| alpha-n-arabinofuranosidase | SAMIE_RS00395 | Not Available | - | 75758 - 77320 | 56401.9 |
| arad1 family protein | SAMIE_RS00400 | Not Available | - | 77354 - 78346 | 35547.1 |
| fadr/gntr family transcriptional regulator | SAMIE_RS00405 | Not Available | + | 78471 - 79223 | 27031.1 |
| sugar mfs transporter | SAMIE_RS00410 | Not Available | - | 79294 - 80601 | 46418.6 |
| aldose epimerase family protein | SAMIE_RS00415 | Not Available | + | 80751 - 81881 | 39640.0 |
| hypothetical protein | SAMIE_RS00420 | Not Available | - | 82024 - 82290 | 9197.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.