Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lycopene beta-cyclase crty | SAMIE_RS00325 | Not Available | + | 62156 - 63298 | 42489.1 |
| phytoene desaturase | SAMIE_RS00330 | Not Available | + | 63298 - 64785 | 54772.4 |
| tigr00730 family rossman fold protein | SAMIE_RS00335 | Not Available | + | 64786 - 65367 | 20561.0 |
| phytoene/squalene synthase family protein | SAMIE_RS00340 | Not Available | + | 65408 - 66361 | 34255.0 |
| ammonium transporter | SAMIE_RS00345 | Not Available | - | 66471 - 67817 | 46131.8 |
| p-ii family nitrogen regulator | SAMIE_RS00350 | Not Available | - | 67831 - 68169 | 11928.5 |
| duf924 family protein | SAMIE_RS00355 | Not Available | - | 68325 - 68900 | 21657.2 |
| metalloprotease tldd | SAMIE_RS00360 | Not Available | - | 68954 - 70396 | 50801.2 |
| zinc-finger domain-containing protein | SAMIE_RS00365 | Not Available | - | 70477 - 70704 | 7956.39 |
| Trna-val | Not Available | Not Available | + | 70935 - 71010 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.