Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tade/tadg family type iv pilus assembly protein | SAMIE_RS00230 | Not Available | - | 44560 - 46485 | 69480.6 |
| peptidylprolyl isomerase | SAMIE_RS00235 | Not Available | + | 46686 - 47576 | 31456.7 |
| lrp/asnc family transcriptional regulator | SAMIE_RS00240 | Not Available | - | 47581 - 48042 | 16973.4 |
| alanine dehydrogenase | SAMIE_RS00245 | Not Available | + | 48196 - 49311 | 38901.1 |
| hypothetical protein | SAMIE_RS23215 | Not Available | + | 49483 - 49623 | 5226.32 |
| sulfite exporter taue/safe family protein | SAMIE_RS00250 | Not Available | + | 49623 - 50453 | 27973.7 |
| phospholipase d-like domain-containing protein | SAMIE_RS00255 | Not Available | - | 50485 - 51687 | 45217.6 |
| dna-directed rna polymerase subunit omega | SAMIE_RS00260 | Not Available | + | 51804 - 52148 | 12354.4 |
| glycine zipper 2tm domain-containing protein | SAMIE_RS00265 | Not Available | - | 52277 - 52588 | 10883.0 |
| uracil-dna glycosylase | SAMIE_RS00270 | Not Available | - | 52717 - 53427 | 25903.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.