Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMIE_RS23630 | Not Available | + | 32762 - 33043 | 10031.1 |
| nad(p)h-dependent oxidoreductase subunit e | SAMIE_RS00185 | Not Available | + | 33333 - 33785 | 16374.7 |
| nadh-ubiquinone oxidoreductase-f iron-sulfur binding region domain-containing protein | SAMIE_RS00190 | Not Available | + | 33806 - 35359 | 54209.5 |
| formate dehydrogenase subunit alpha | SAMIE_RS00195 | Not Available | + | 35356 - 38202 | 103201.0 |
| formate dehydrogenase subunit delta | SAMIE_RS00200 | Not Available | + | 38212 - 38484 | 9879.6 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | SAMIE_RS00205 | Not Available | + | 38638 - 39750 | 39482.7 |
| s-formylglutathione hydrolase | SAMIE_RS00210 | Not Available | + | 39761 - 40600 | 30161.7 |
| glycosyl hydrolase 115 family protein | SAMIE_RS00215 | Not Available | + | 40742 - 43324 | 94825.2 |
| tade/tadg family type iv pilus assembly protein | SAMIE_RS00220 | Not Available | - | 43313 - 43948 | 22793.5 |
| tade/tadg family type iv pilus assembly protein | SAMIE_RS00225 | Not Available | - | 43948 - 44556 | 21963.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.