Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense
Accession NumberNZ_AP018664.1
Gene Summary
Adenine Count
741674 bp
Thymine Count
743657 bp
Guanine Count
1371259 bp
Cytosine Count
1365174 bp
Genome Length
4221764 bp
Protein-coding Genes
4004 genes
Non-Coding Genes
95 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aquaporin | SAMIE_RS00135 | Not Available | - | 24008 - 24691 | 23421.0 |
| arsr/smtb family transcription factor | SAMIE_RS00140 | Not Available | - | 24688 - 24996 | 10889.2 |
| acetyl-coa carboxylase biotin carboxylase subunit | SAMIE_RS00145 | Not Available | - | 25044 - 26393 | 48933.7 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | SAMIE_RS00150 | Not Available | - | 26408 - 26887 | 16153.4 |
| type ii 3-dehydroquinate dehydratase | SAMIE_RS00155 | Not Available | - | 26981 - 27421 | 16131.2 |
| sulfur carrier protein this | SAMIE_RS00160 | Not Available | + | 27537 - 28538 | 35209.7 |
| gnat family n-acetyltransferase | SAMIE_RS00165 | Not Available | + | 28605 - 29495 | 32149.4 |
| tyrosine-type recombinase/integrase | SAMIE_RS00170 | Not Available | - | 29623 - 30666 | 39075.7 |
| tyrosine-type recombinase/integrase | SAMIE_RS00175 | Not Available | - | 30663 - 31577 | 34771.8 |
| tyrosine-type recombinase/integrase | SAMIE_RS00180 | Not Available | - | 31574 - 32791 | 45314.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.