Xanthomonas oryzae pv. oryzicola str. CFBP7342

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas oryzae pv. oryzicola str. CFBP7342 is a Gram-negative, rod-shaped bacterium that is classified within the Xanthomonadaceae family. This microbe is primarily associated with host organisms, indicating its specialization to thrive in environments closely linked to its biological hosts. It exhibits an aerobic metabolism, necessitating oxygen for its growth and survival, which is characteristic of many bacteria within its genus. The rod shape of X. oryzae pv. oryzicola str. CFBP7342 may play a role in its motility and colonization abilities, potentially facilitating its interactions with plant tissues. The association with host organisms suggests that this bacterium may have evolved specific mechanisms to adapt to the plant environment, which could include the secretion of virulence factors or the establishment of symbiotic relationships. The ecological significance of Xanthomonas oryzae pv. oryzicola str. CFBP7342 lies in its potential role in influencing plant health and agriculture, as its habitat is intimately linked to host plants. Understanding the traits of this bacterium could contribute to elucidating its interactions within the plant microbiome and its impact on agricultural systems, particularly in rice cultivation. Further research into its metabolic pathways and host interactions may reveal insights into its ecological niche and potential management strategies in agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Xanthomonas oryzae pv. oryzicola str. CFBP7342
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas oryzae pv. oryzicola str. CFBP7342

Accession NumberNZ_CP007221.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Phage lytic enzymeBE73_RS05630Not Available+1246111 - 124674923291.9
Gp32BE73_RS05635Not Available+1246749 - 124723716964.2
Predicted tail completionBE73_RS05640Not Available+1247234 - 124765315190.2
Tail completion proteinBE73_RS05645Not Available+1247641 - 124809016809.5
Baseplate assembly proteinBE73_RS23185Not Available+1248172 - 124906231801.7
Baseplate assembly proteinBE73_RS05655Not Available+1249055 - 124960020090.9
Putative phage tail fiber proteinBE73_RS05660Not Available+1249610 - 125111551121.6
Tail fiber assembly proteinBE73_RS05665Not Available+1251123 - 125170120592.3
Baseplate assembly proteinBE73_RS05670Not Available+1251762 - 125232519032.6
Baseplate assembly proteinBE73_RS05675Not Available+1252322 - 125268113010.9

Displaying genes 71 – 80 of 4713 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites