Sphingobium xenophagum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium xenophagum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium xenophagum

Accession NumberBBQY00000000.1

Gene Summary

Adenine Count

859502 bp

Thymine Count

870348 bp

Guanine Count

1474864 bp

Cytosine Count

1440440 bp

Genome Length

4645154 bp

Protein-coding Genes

4447 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
signal peptidase iMBESOW_P0559Not Available-615105 - 61601633239.0
holo-[acyl-carrier protein] synthaseMBESOW_P0560Not Available-616013 - 61641414360.5
pyridoxine 5-phosphate synthaseMBESOW_P0561Not Available-616411 - 61712124944.0
orotate phosphoribosyltransferaseMBESOW_P0562Not Available-617152 - 61774220991.6
cytochrome c oxidase subunit iiMBESOW_P0563Not Available+618018 - 61903435622.4
cytochrome c oxidase subunit iMBESOW_P0564Not Available+619053 - 62074761809.8
heme o synthaseMBESOW_P0565Not Available+620838 - 62174632989.3
hypothetical proteinMBESOW_P0566Not Available+621743 - 6218804846.17
cytochrome c oxidase assembly protein subunit 11MBESOW_P0567Not Available+621880 - 62245521440.7
cytochrome c oxidase subunit iiiMBESOW_P0568Not Available+622500 - 62333030618.2

Displaying genes 591 – 600 of 4511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00038332-hydroxychromene-2-carboxylateC10H7O4Not availableNot available
Average191.163Da
Monoisotopic191.034982285Da
BASm0003834(3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoateC10H7O4Chemical structure of (3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoateNot available
Average191.163Da
Monoisotopic191.034982285Da

Displaying 1–2 of 2 metabolites