Sphingobium xenophagum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium xenophagum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium xenophagum OW59 DNA, contig: OW59_C105, whole genome

Gene Summary

Adenine Count

859502 bp

Thymine Count

870348 bp

Guanine Count

1474864 bp

Cytosine Count

1440440 bp

Genome Length

4645154 bp

Protein-coding Genes

4447 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
quinohemoprotein ethanol dehydrogenaseMBESOW_P4471Not AvailablePositive4581385 - 458358078710.4
chromosome partitioning protein, parb familyMBESOW_P4266Not AvailablePositive4583748 - 45839698467.82
transposaseMBESOW_P4267Not AvailablePositive4584113 - 458445112315.0
transposaseMBESOW_P4268Not AvailablePositive4584448 - 458480412862.8
hypothetical proteinMBESOW_P4269Not AvailablePositive4584836 - 458640158629.2
chromosome partitioning protein, parb familyMBESOW_P4270Not AvailablePositive4586436 - 458712224888.3
chromosome partitioning protein, parb familyMBESOW_P4272Not AvailablePositive4587062 - 458742413190.3
hypothetical proteinMBESOW_P4273Not AvailablePositive4587537 - 45877949122.89
ribonuclease vapcMBESOW_P4274Not AvailablePositive4587791 - 458818914136.0
hypothetical proteinMBESOW_P4275Not AvailableNegative4588268 - 458892724717.4

Displaying genes 4431 – 4440 of 4511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm00038332-hydroxychromene-2-carboxylateC10H7O4Not availableNot available
Average191.163Da
Monoisotopic191.034982285Da
BASm0003834(3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoateC10H7O4Chemical structure of (3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoateNot available
Average191.163Da
Monoisotopic191.034982285Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0040130Pseudomonas sp. C18Not availableNot availableNot available

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.