Sphingobium xenophagum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium xenophagum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium xenophagum

Accession NumberBBQY00000000.1

Gene Summary

Adenine Count

859502 bp

Thymine Count

870348 bp

Guanine Count

1474864 bp

Cytosine Count

1440440 bp

Genome Length

4645154 bp

Protein-coding Genes

4447 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
merr family transcriptional regulator, copper efflux regulatorMBESOW_P4000Not Available-4250797 - 425119514787.7
cu+-exporting atpaseMBESOW_P4001Not Available-4251192 - 425354982021.0
hypothetical proteinMBESOW_P4002Not Available-4253660 - 425433424385.5
copper resistance protein dMBESOW_P4003Not Available-4254373 - 425530532177.7
copper resistance protein cMBESOW_P4004Not Available-4255310 - 425569013237.2
hypothetical proteinMBESOW_P4005Not Available+4255823 - 42560959378.34
hypothetical proteinMBESOW_P4006Not Available+4256092 - 425653516528.1
rna polymerase sigma-70 factor, ecf subfamilyMBESOW_P4007Not Available+4256532 - 425709820816.1
hypothetical proteinMBESOW_P4008Not Available+4257165 - 425909069547.5
copper resistance protein bMBESOW_P4009Not Available+4259090 - 426025641798.2

Displaying genes 4071 – 4080 of 4511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm00038332-hydroxychromene-2-carboxylateC10H7O4Not availableNot available
Average191.163Da
Monoisotopic191.034982285Da
BASm0003834(3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoateC10H7O4Chemical structure of (3E)-4-(2-hydroxyphenyl)-2-oxobut-3-enoateNot available
Average191.163Da
Monoisotopic191.034982285Da

Displaying 1–2 of 2 metabolites