Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio penaeicida |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Vibrio penaeicida str. CAIM 285
Accession NumberRXYX00000000.1
Gene Summary
Adenine Count
1840482 bp
Thymine Count
1843832 bp
Guanine Count
1447206 bp
Cytosine Count
1443556 bp
Genome Length
6616470 bp
Protein-coding Genes
5634 genes
Non-Coding Genes
154 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trkh family potassium uptake protein | EKN09_25845 | Not Available | - | 5663281 - 5664726 | 52337.1 |
| trk system potassium transporter trka | EKN09_25850 | Not Available | - | 5664784 - 5666160 | 50240.5 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | EKN09_25855 | Not Available | - | 5666242 - 5667522 | 47893.1 |
| methionyl-trna formyltransferase | EKN09_25860 | Not Available | - | 5667660 - 5668607 | 34182.9 |
| peptide deformylase | EKN09_25865 | Not Available | - | 5668642 - 5669163 | 19529.5 |
| lysm peptidoglycan-binding domain-containing protein | EKN09_25870 | Not Available | + | 5669281 - 5670387 | 41134.2 |
| dna-protecting protein dpra | EKN09_25875 | Not Available | + | 5670388 - 5671488 | 39526.2 |
| duf494 domain-containing protein | EKN09_25880 | Not Available | + | 5671491 - 5671964 | 18302.0 |
| dna topoisomerase | EKN09_25885 | Not Available | + | 5671978 - 5672547 | 21166.4 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | EKN09_25890 | Not Available | - | 5672628 - 5673755 | 40639.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
