Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Idiomarinaceae
Genus
Idiomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Idiomarinaceae |
| Genus | Idiomarina |
| Species | Idiomarina abyssalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Idiomarina abyssalis str. 017G.2
Accession NumberQRBK00000000.1
Gene Summary
Adenine Count
742747 bp
Thymine Count
741045 bp
Guanine Count
651388 bp
Cytosine Count
658971 bp
Genome Length
2794880 bp
Protein-coding Genes
2632 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chaps (chs5p-arf1p-binding) protein | DFO82_0668 | Not Available | + | 683400 - 685043 | 62655.0 |
| hypothetical protein | DFO82_0669 | Not Available | - | 685040 - 685876 | 30744.6 |
| putative glutathione s-transferase | DFO82_0670 | Not Available | - | 685873 - 686835 | 37239.5 |
| lipid-a-disaccharide synthase | DFO82_0671 | Not Available | - | 686930 - 688069 | 42350.8 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | DFO82_0672 | Not Available | - | 688069 - 688836 | 27781.0 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | DFO82_0673 | Not Available | - | 688837 - 689292 | 16991.6 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | DFO82_0674 | Not Available | - | 689307 - 690332 | 36236.8 |
| periplasmic chaperone for outer membrane proteins skp | DFO82_0675 | Not Available | - | 690336 - 690851 | 19345.9 |
| beta-barrel assembly machine subunit bama | DFO82_0676 | Not Available | - | 690896 - 693397 | 93852.1 |
| site-2 protease | DFO82_0677 | Not Available | - | 693429 - 694784 | 49314.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.