Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae
Accession NumberJZSI00000000.1
Gene Summary
Adenine Count
1472813 bp
Thymine Count
1468197 bp
Guanine Count
950399 bp
Cytosine Count
973739 bp
Genome Length
4865148 bp
Protein-coding Genes
3744 genes
Non-Coding Genes
128 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n5-carboxyaminoimidazole ribonucleotide mutase | UB36_18415 | Not Available | + | 4157803 - 4158291 | 16843.4 |
| phosphoribosylaminoimidazole carboxylase | UB36_18420 | Not Available | + | 4158291 - 4159409 | 40785.7 |
| dna topoisomerase | UB36_18425 | Not Available | - | 4159454 - 4160029 | 21129.2 |
| hypothetical protein | UB36_18430 | Not Available | - | 4160122 - 4160595 | 18415.9 |
| dna processing protein dpra | UB36_18435 | Not Available | - | 4160598 - 4161695 | 39475.2 |
| peptigoglycan-binding protein lysm | UB36_18440 | Not Available | - | 4161703 - 4162764 | 39461.5 |
| peptide deformylase | UB36_18445 | Not Available | + | 4163120 - 4163629 | 18924.8 |
| methionyl-trna formyltransferase | UB36_18450 | Not Available | + | 4163646 - 4164590 | 33897.7 |
| 16s rrna methyltransferase | UB36_18455 | Not Available | + | 4164679 - 4165959 | 47490.1 |
| potassium transporter peripheral membrane component | UB36_18460 | Not Available | + | 4166080 - 4167456 | 50433.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.