Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | FD722_01675 | Not Available | - | 346120 - 346614 | 17381.4 |
| duf4118 domain-containing protein | FD722_01690 | Not Available | + | 349561 - 351078 | 56709.0 |
| lysr family transcriptional regulator | FD722_01715 | Not Available | + | 354586 - 355467 | 32368.0 |
| alkene reductase | FD722_01720 | Not Available | + | 355693 - 356790 | 39742.8 |
| alkene reductase | FD722_01725 | Not Available | + | 356800 - 357888 | 39944.2 |
| alcohol dehydrogenase | FD722_01730 | Not Available | + | 357955 - 358896 | 34844.3 |
| phosphoenolpyruvate--protein phosphotransferase | FD722_01735 | Not Available | - | 359267 - 361768 | 92090.6 |
| pts fructose transporter subunit iib | FD722_01740 | Not Available | - | 361792 - 362109 | 11693.2 |
| llm class flavin-dependent oxidoreductase | FD722_01745 | Not Available | - | 362409 - 363440 | 39023.2 |
| nad-dependent epimerase/dehydratase family protein | FD722_01750 | Not Available | + | 363789 - 364640 | 31586.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.