Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrogen peroxide-inducible genes activator | FD722_03715 | Not Available | + | 805853 - 806749 | 33094.2 |
| malate synthase a | FD722_03720 | Not Available | + | 807413 - 809011 | 60368.0 |
| isocitrate lyase | FD722_03725 | Not Available | + | 809092 - 810399 | 47998.5 |
| cbs domain-containing protein | FD722_03730 | Not Available | - | 810484 - 810960 | 17267.7 |
| trypsin-like serine protease | FD722_03735 | Not Available | + | 811134 - 812252 | 40689.6 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | FD722_03740 | Not Available | + | 812347 - 813399 | 38947.2 |
| trna guanosine(34) transglycosylase tgt | FD722_03745 | Not Available | + | 813707 - 814840 | 42933.5 |
| preprotein translocase subunit yajc | FD722_03750 | Not Available | + | 814864 - 815202 | 12170.1 |
| protein translocase subunit secd | FD722_03755 | Not Available | + | 815246 - 817099 | 67193.8 |
| protein translocase subunit secf | FD722_03760 | Not Available | + | 817113 - 818060 | 34168.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.