Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2500 domain-containing protein | FD722_03565 | Not Available | + | 770100 - 770432 | 12650.4 |
| acyltransferase | FD722_03570 | Not Available | - | 770442 - 771455 | 38664.9 |
| sdr family oxidoreductase | FD722_03575 | Not Available | - | 771555 - 772277 | 25968.4 |
| abgt family transporter | FD722_03580 | Not Available | + | 772751 - 774352 | 56731.5 |
| lysr family transcriptional regulator | FD722_03585 | Not Available | + | 774465 - 775313 | 31755.7 |
| patatin family protein | FD722_03590 | Not Available | + | 775409 - 776302 | 33208.6 |
| dna starvation/stationary phase protection protein | FD722_03595 | Not Available | + | 776439 - 776915 | 18312.9 |
| homoserine/homoserine lactone efflux protein | FD722_03600 | Not Available | - | 777167 - 777784 | 21900.3 |
| alpha/beta fold hydrolase | FD722_03605 | Not Available | + | 777998 - 778936 | 35850.7 |
| cof-type had-iib family hydrolase | FD722_03610 | Not Available | + | 779088 - 779885 | 29435.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.