Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator | FD722_03165 | Not Available | + | 692259 - 692948 | 26065.7 |
| envelope stress sensor histidine kinase cpxa | FD722_03170 | Not Available | + | 692948 - 694309 | 51834.5 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | FD722_03175 | Not Available | + | 694403 - 694867 | 17438.9 |
| serine o-acetyltransferase | FD722_03180 | Not Available | - | 694926 - 695747 | 29323.4 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | FD722_03185 | Not Available | - | 695879 - 696895 | 35971.2 |
| protein-export chaperone secb | FD722_03190 | Not Available | - | 696919 - 697386 | 17163.2 |
| rhodanese-like domain-containing protein | FD722_03195 | Not Available | - | 697479 - 697919 | 16121.6 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | FD722_03200 | Not Available | + | 698328 - 699869 | 55754.1 |
| peptidase m23 | FD722_03205 | Not Available | + | 699887 - 701074 | 43702.6 |
| tetr/acrr family transcriptional regulator | FD722_03210 | Not Available | - | 701139 - 701780 | 25050.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.