Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| adenine-specific dna-methyltransferase | FD722_02965 | Not Available | - | 645425 - 646267 | 32197.2 |
| hypothetical protein | FD722_02970 | Not Available | - | 646375 - 647883 | 55838.3 |
| 3-dehydroquinate synthase | FD722_02975 | Not Available | - | 647898 - 648977 | 38843.0 |
| shikimate kinase arok | FD722_02980 | Not Available | - | 649007 - 649525 | 19512.1 |
| type iv pilus secretin pilq family protein | FD722_02985 | Not Available | - | 649855 - 651606 | 63703.2 |
| pilus assembly protein pilp | FD722_02990 | Not Available | - | 651606 - 652121 | 19137.3 |
| fimbrial protein | FD722_02995 | Not Available | - | 652130 - 652720 | 22700.8 |
| pilus assembly protein pils | FD722_03000 | Not Available | - | 652717 - 653358 | 24047.2 |
| type iv pilus assembly protein pilm | FD722_03005 | Not Available | - | 653355 - 654353 | 37015.7 |
| pbp1a family penicillin-binding protein | FD722_03010 | Not Available | + | 654645 - 657077 | 89235.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.