Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | FD722_02765 | Not Available | - | 606223 - 608121 | 70310.6 |
| dna-binding protein hu-beta | FD722_02770 | Not Available | - | 608472 - 608744 | 9362.11 |
| endopeptidase la | FD722_02775 | Not Available | - | 608945 - 611308 | 87858.6 |
| atp-dependent protease atp-binding subunit clpx | FD722_02780 | Not Available | - | 611534 - 612814 | 46816.0 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | FD722_02785 | Not Available | - | 612927 - 613550 | 22932.6 |
| trigger factor | FD722_02790 | Not Available | - | 613656 - 614954 | 47520.9 |
| Trna-arg | Not Available | Not Available | + | 615468 - 615544 | Not Available |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | FD722_02800 | Not Available | + | 615802 - 616662 | 30813.4 |
| elongation factor tu | FD722_02805 | Not Available | - | 616736 - 616813 | 2933.51 |
| elongation factor g | FD722_02810 | Not Available | - | 616913 - 619018 | 77659.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.