Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | FD722_02715 | Not Available | - | 596299 - 597117 | 30208.2 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | FD722_02720 | Not Available | - | 597101 - 598876 | 63913.3 |
| isochorismate synthase | FD722_02725 | Not Available | - | 598858 - 600255 | 52632.6 |
| pyridoxal phosphate-dependent aminotransferase | FD722_02730 | Not Available | + | 600694 - 601908 | 45449.1 |
| 5'-deoxynucleotidase | FD722_02735 | Not Available | + | 602018 - 602602 | 22292.8 |
| deoxyguanosinetriphosphate triphosphohydrolase family protein | FD722_02740 | Not Available | + | 602602 - 603930 | 50817.7 |
| dtw domain-containing protein | FD722_02745 | Not Available | - | 604079 - 604696 | 23119.8 |
| rhombosortase | FD722_02750 | Not Available | + | 604706 - 605263 | 20364.0 |
| duf1971 domain-containing protein | FD722_02755 | Not Available | + | 605350 - 605688 | 12748.9 |
| helix-hairpin-helix domain-containing protein | FD722_02760 | Not Available | - | 605773 - 606060 | 10446.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.