Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3',5'-cyclic-nucleotide phosphodiesterase | FD722_02665 | Not Available | + | 586226 - 587209 | 36286.1 |
| cpbp family intramembrane metalloprotease | FD722_02670 | Not Available | - | 587337 - 588188 | 31283.7 |
| ycgn family cysteine cluster protein | FD722_02675 | Not Available | - | 588353 - 588790 | 16941.7 |
| ykgj family cysteine cluster protein | FD722_02680 | Not Available | + | 589056 - 589310 | 8966.94 |
| tigr02647 family protein | FD722_02685 | Not Available | - | 589330 - 589575 | 8869.73 |
| hypothetical protein | FD722_02690 | Not Available | - | 589829 - 590689 | 31522.8 |
| tetr/acrr family transcriptional regulator | FD722_02695 | Not Available | + | 591281 - 591877 | 22738.1 |
| mfs transporter | FD722_02700 | Not Available | + | 591892 - 593769 | 69517.5 |
| o-succinylbenzoate--coa ligase | FD722_02705 | Not Available | - | 593854 - 595284 | 52994.5 |
| o-succinylbenzoate synthase | FD722_02710 | Not Available | - | 595272 - 596246 | 35650.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.