Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| extradiol dioxygenase | FD722_02615 | Not Available | - | 572971 - 573351 | 13525.2 |
| prka family serine protein kinase | FD722_02620 | Not Available | + | 574012 - 575946 | 74399.1 |
| yeah/yhbh family protein | FD722_02625 | Not Available | + | 575997 - 577268 | 48841.6 |
| spovr family protein | FD722_02630 | Not Available | + | 577355 - 578884 | 60350.4 |
| fatty acid metabolism transcriptional regulator fadr | FD722_02635 | Not Available | - | 578968 - 579819 | 32794.2 |
| na(+)/h(+) antiporter nhab | FD722_02640 | Not Available | + | 580416 - 582005 | 57699.9 |
| disulfide bond formation protein dsbb | FD722_02645 | Not Available | + | 582235 - 582747 | 19478.1 |
| upf0149 family protein | FD722_02650 | Not Available | - | 582826 - 583449 | 23015.7 |
| trna dihydrouridine(16) synthase dusc | FD722_02655 | Not Available | + | 583631 - 584575 | 35350.5 |
| metalloprotease | FD722_02660 | Not Available | + | 584816 - 585679 | 31354.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.