Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| selenide, water dikinase seld | FD722_02565 | Not Available | - | 561200 - 562234 | 36407.6 |
| nad(p)h nitroreductase | FD722_02570 | Not Available | - | 562435 - 562983 | 19714.8 |
| fad-dependent oxidoreductase | FD722_02575 | Not Available | - | 563049 - 565061 | 73296.3 |
| signal peptide peptidase sppa | FD722_02580 | Not Available | + | 565332 - 567185 | 67415.7 |
| asparaginase | FD722_02585 | Not Available | + | 567452 - 568465 | 36906.5 |
| duf1315 family protein | FD722_02590 | Not Available | - | 568542 - 568826 | 10819.0 |
| duf2989 domain-containing protein | FD722_02595 | Not Available | + | 569029 - 569880 | 33258.7 |
| peptide-methionine (r)-s-oxide reductase msrb | FD722_02600 | Not Available | - | 569955 - 570350 | 14732.0 |
| type i glyceraldehyde-3-phosphate dehydrogenase | FD722_02605 | Not Available | + | 570688 - 571683 | 35205.8 |
| d-hexose-6-phosphate mutarotase | FD722_02610 | Not Available | + | 572007 - 572882 | 32610.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.