Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin flda | FD722_02515 | Not Available | + | 550278 - 550766 | 17851.6 |
| nitrous oxide-stimulated promoter family protein | FD722_02520 | Not Available | - | 550923 - 551288 | 13973.2 |
| nucleoid-associated protein yejk | FD722_02525 | Not Available | - | 551587 - 552600 | 38361.0 |
| duf1414 domain-containing protein | FD722_02530 | Not Available | + | 552677 - 552895 | 7888.57 |
| duf3413 domain-containing protein | FD722_02535 | Not Available | + | 552943 - 554811 | 71417.1 |
| hypothetical protein | FD722_02540 | Not Available | - | 554852 - 555112 | 10256.9 |
| ggdef domain-containing protein | FD722_02545 | Not Available | + | 555363 - 556979 | 62298.0 |
| dna topoisomerase iii | FD722_02550 | Not Available | - | 557021 - 559009 | 73726.6 |
| glucosaminidase | FD722_02555 | Not Available | + | 559173 - 560012 | 31540.8 |
| trna 2-selenouridine(34) synthase mnmh | FD722_02560 | Not Available | - | 560106 - 561200 | 41539.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.