Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional antiterminator | FD722_02410 | Not Available | + | 522986 - 523267 | 10737.9 |
| grx4 family monothiol glutaredoxin | FD722_02415 | Not Available | - | 523379 - 523708 | 12190.8 |
| superoxide dismutase | FD722_02420 | Not Available | + | 524216 - 524800 | 21484.1 |
| aspartate-semialdehyde dehydrogenase | FD722_02425 | Not Available | - | 524972 - 526087 | 40329.6 |
| na+/h+ antiporter nhac | FD722_02430 | Not Available | + | 526795 - 528243 | 51163.7 |
| yjih family protein | FD722_02435 | Not Available | + | 528791 - 529525 | 26018.3 |
| hypothetical protein | FD722_02440 | Not Available | + | 529525 - 529986 | 16005.5 |
| m20 family metallopeptidase | FD722_02445 | Not Available | + | 530070 - 531194 | 40071.9 |
| duf3592 domain-containing protein | FD722_02450 | Not Available | - | 531270 - 531809 | 20572.6 |
| hypothetical protein | FD722_02455 | Not Available | - | 531915 - 532988 | 42247.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.