Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae str. 89dp-OG16
Accession NumberVANH00000000.1
Gene Summary
Adenine Count
1323477 bp
Thymine Count
1337593 bp
Guanine Count
935882 bp
Cytosine Count
907215 bp
Genome Length
4504167 bp
Protein-coding Genes
3860 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiouridine(34) synthase mnma | FD722_02210 | Not Available | + | 479309 - 480421 | 41530.2 |
| high frequency lysogenization protein hfld | FD722_02215 | Not Available | + | 480437 - 481057 | 22932.1 |
| adenylosuccinate lyase | FD722_02220 | Not Available | + | 481140 - 482507 | 51218.2 |
| anaerobic nitric oxide reductase flavorubredoxin | FD722_02225 | Not Available | + | 482771 - 484258 | 55456.8 |
| nadh:flavorubredoxin reductase norw | FD722_02230 | Not Available | + | 484283 - 485434 | 41409.8 |
| duf1294 domain-containing protein | FD722_02235 | Not Available | - | 485511 - 485873 | 13973.9 |
| cupin domain-containing protein | FD722_02240 | Not Available | + | 486120 - 487253 | 43323.7 |
| eal domain-containing protein | FD722_02245 | Not Available | + | 487496 - 488431 | 35260.2 |
| diguanylate cyclase | FD722_02250 | Not Available | + | 488436 - 489989 | 60097.2 |
| abc transporter atp-binding protein | FD722_02255 | Not Available | - | 490075 - 491061 | 36162.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.